Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN9_055060Uncharacterized protein. (593 aa)    
Predicted Functional Partners:
BN9_010930
WD_REPEATS_REGION domain-containing protein.
    
 0.782
BN9_010940
WD_REPEATS_REGION domain-containing protein.
    
 0.782
BN9_038810
CRC domain-containing protein.
    
 0.762
BN9_038820
CRC domain-containing protein.
    
 0.762
BN9_103880
CRC domain-containing protein.
    
 0.762
BN9_013760
Uncharacterized protein.
   
 
 0.703
BN9_048590
Uncharacterized protein; Belongs to the cyclin family.
   
 0.693
BN9_101080
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.693
BN9_076900
Uncharacterized protein.
    
 0.674
BN9_076890
Uncharacterized protein.
    
 0.674
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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