BN9_054260 protein (Albugo candida) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Neighborhood

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Co-occurrence

Co-expression

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[Homology]

Score

BN9_054260

Uncharacterized protein. (1327 aa)

Predicted Functional Partners:

BN9_096330

0.997

BN9_086470

0.996

BN9_003260

0.991

BN9_014420

0.989

BN9_027950

0.988

BN9_042960

0.988

BN9_122700

0.986

BN9_086740

0.981

BN9_055890

0.978

BN9_037010

0.976

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_003260	BN9_014420	A0A024FZ17	A0A024G2W5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.991
BN9_003260	BN9_027950	A0A024FZ17	A0A024G5H9	Uncharacterized protein.	Uncharacterized protein.	0.981
BN9_003260	BN9_037010	A0A024FZ17	A0A024G9E6	Uncharacterized protein.	DEP domain-containing protein.	0.970
BN9_003260	BN9_042960	A0A024FZ17	A0A024GB10	Uncharacterized protein.	Uncharacterized protein.	0.596
BN9_003260	BN9_054260	A0A024FZ17	A0A024GD52	Uncharacterized protein.	Uncharacterized protein.	0.991
BN9_003260	BN9_055890	A0A024FZ17	A0A024GD28	Uncharacterized protein.	Uncharacterized protein.	0.686
BN9_003260	BN9_086470	A0A024FZ17	A0A024GLJ1	Uncharacterized protein.	Uncharacterized protein.	0.934
BN9_003260	BN9_086740	A0A024FZ17	A0A024GM98	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.826
BN9_003260	BN9_096330	A0A024FZ17	A0A024GPQ3	Uncharacterized protein.	HORMA domain-containing protein.	0.995
BN9_003260	BN9_122700	A0A024FZ17	A0A024GUM7	Uncharacterized protein.	ANAPC5 domain-containing protein.	0.990
BN9_014420	BN9_003260	A0A024G2W5	A0A024FZ17	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.991
BN9_014420	BN9_027950	A0A024G2W5	A0A024G5H9	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.996
BN9_014420	BN9_037010	A0A024G2W5	A0A024G9E6	TPR_REGION domain-containing protein.	DEP domain-containing protein.	0.965
BN9_014420	BN9_054260	A0A024G2W5	A0A024GD52	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.989
BN9_014420	BN9_086740	A0A024G2W5	A0A024GM98	TPR_REGION domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.995
BN9_014420	BN9_096330	A0A024G2W5	A0A024GPQ3	TPR_REGION domain-containing protein.	HORMA domain-containing protein.	0.989
BN9_014420	BN9_122700	A0A024G2W5	A0A024GUM7	TPR_REGION domain-containing protein.	ANAPC5 domain-containing protein.	0.998
BN9_027950	BN9_003260	A0A024G5H9	A0A024FZ17	Uncharacterized protein.	Uncharacterized protein.	0.981
BN9_027950	BN9_014420	A0A024G5H9	A0A024G2W5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.996
BN9_027950	BN9_037010	A0A024G5H9	A0A024G9E6	Uncharacterized protein.	DEP domain-containing protein.	0.965