BN9_050570 protein (Albugo candida) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Neighborhood

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Co-occurrence

Co-expression

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[Homology]

Score

BN9_050570

Uncharacterized protein. (994 aa)

Predicted Functional Partners:

BN9_077360

0.859

BN9_003910

0.854

BN9_121230

0.854

BN9_016320

0.843

BN9_090410

0.828

BN9_047350

0.732

BN9_026000

0.706

BN9_084530

0.706

BN9_054410

0.695

BN9_126540

0.693

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_003910	BN9_016320	A0A024FZ71	A0A024G1Y6	Uncharacterized protein.	FHA domain-containing protein.	0.987
BN9_003910	BN9_026000	A0A024FZ71	A0A024G4X8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.870
BN9_003910	BN9_047350	A0A024FZ71	A0A024GAS5	Uncharacterized protein.	Uncharacterized protein.	0.932
BN9_003910	BN9_050570	A0A024FZ71	A0A024GD63	Uncharacterized protein.	Uncharacterized protein.	0.854
BN9_003910	BN9_054410	A0A024FZ71	A0A024GCY5	Uncharacterized protein.	Uncharacterized protein.	0.888
BN9_003910	BN9_077360	A0A024FZ71	A0A024GJ86	Uncharacterized protein.	Uncharacterized protein.	0.993
BN9_003910	BN9_084530	A0A024FZ71	A0A024GKQ8	Uncharacterized protein.	Uncharacterized protein.	0.942
BN9_003910	BN9_090410	A0A024FZ71	A0A024GMK4	Uncharacterized protein.	Uncharacterized protein.	0.987
BN9_003910	BN9_121230	A0A024FZ71	A0A024GUI7	Uncharacterized protein.	Uncharacterized protein.	0.993
BN9_003910	BN9_126540	A0A024FZ71	A0A024GVW9	Uncharacterized protein.	Uncharacterized protein.	0.730
BN9_016320	BN9_003910	A0A024G1Y6	A0A024FZ71	FHA domain-containing protein.	Uncharacterized protein.	0.987
BN9_016320	BN9_026000	A0A024G1Y6	A0A024G4X8	FHA domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.806
BN9_016320	BN9_047350	A0A024G1Y6	A0A024GAS5	FHA domain-containing protein.	Uncharacterized protein.	0.963
BN9_016320	BN9_050570	A0A024G1Y6	A0A024GD63	FHA domain-containing protein.	Uncharacterized protein.	0.843
BN9_016320	BN9_054410	A0A024G1Y6	A0A024GCY5	FHA domain-containing protein.	Uncharacterized protein.	0.939
BN9_016320	BN9_077360	A0A024G1Y6	A0A024GJ86	FHA domain-containing protein.	Uncharacterized protein.	0.974
BN9_016320	BN9_084530	A0A024G1Y6	A0A024GKQ8	FHA domain-containing protein.	Uncharacterized protein.	0.965
BN9_016320	BN9_090410	A0A024G1Y6	A0A024GMK4	FHA domain-containing protein.	Uncharacterized protein.	0.982
BN9_016320	BN9_121230	A0A024G1Y6	A0A024GUI7	FHA domain-containing protein.	Uncharacterized protein.	0.986
BN9_016320	BN9_126540	A0A024G1Y6	A0A024GVW9	FHA domain-containing protein.	Uncharacterized protein.	0.929