STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_050670Ubiquitin-like domain-containing protein. (710 aa)    
Predicted Functional Partners:
BN9_133600
Uncharacterized protein.
   
 0.990
BN9_052550
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.977
BN9_093330
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.977
BN9_012830
VWFA domain-containing protein.
   
 0.975
BN9_051230
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.975
BN9_065190
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.973
BN9_101000
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.972
BN9_001730
Uncharacterized protein.
   
 0.971
BN9_100730
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.971
BN9_056610
Uncharacterized protein.
   
 0.970
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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