STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_055510Uncharacterized protein. (992 aa)    
Predicted Functional Partners:
BN9_016000
t-SNARE coiled-coil homology domain-containing protein.
   
 0.935
BN9_095600
t-SNARE coiled-coil homology domain-containing protein.
   
 0.935
BN9_117910
GRASP55_65 domain-containing protein.
    
 0.918
BN9_027720
Uncharacterized protein.
    
 0.908
BN9_130810
Uncharacterized protein.
    
 0.908
BN9_074360
Uso1_p115_head domain-containing protein.
    
 0.874
BN9_001060
Uncharacterized protein.
    
 0.705
BN9_025080
Uncharacterized protein.
    
 0.705
BN9_031630
Uncharacterized protein.
    
 0.705
BN9_003830
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
     
 0.681
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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