STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_060830Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (407 aa)    
Predicted Functional Partners:
BN9_063660
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.984
BN9_063670
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.984
BN9_063650
Uncharacterized protein.
  
 
 0.949
BN9_049570
Uncharacterized protein.
  
 0.943
BN9_086240
Uncharacterized protein; Belongs to the ferrochelatase family.
 
  
 0.913
BN9_086250
Uncharacterized protein; Belongs to the ferrochelatase family.
 
  
 0.913
BN9_086230
Uncharacterized protein; Belongs to the ferrochelatase family.
 
  
 0.912
BN9_066240
Uncharacterized protein.
 
 0.826
BN9_066200
Uncharacterized protein.
 
 0.815
BN9_066230
Uncharacterized protein.
 
 0.813
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.