STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_060580UBIQUITIN_CONJUGAT_2 domain-containing protein. (353 aa)    
Predicted Functional Partners:
BN9_021590
E2_bind domain-containing protein.
    
 0.977
BN9_065850
RING-type domain-containing protein.
    
 0.974
BN9_004310
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
 0.920
BN9_080770
PI3K/PI4K domain-containing protein.
    
 0.918
BN9_112990
NEDD8-activating enzyme E1 regulatory subunit.
    
 0.910
BN9_113000
NEDD8-activating enzyme E1 regulatory subunit.
    
 0.910
BN9_112980
NEDD8-activating enzyme E1 regulatory subunit.
    
 0.910
BN9_000060
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.905
BN9_116630
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.888
BN9_000230
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.888
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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