STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_065710Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
BN9_031950
Splicing factor subunit; Belongs to the SF3B5 family.
    
 
 0.940
BN9_030940
SF3b1 domain-containing protein.
    
 
 0.919
BN9_121520
RRM domain-containing protein.
    
 
 0.904
BN9_121440
Uncharacterized protein.
    
 
 0.904
BN9_019390
CPSF_A domain-containing protein.
    
 
 0.837
BN9_019380
CPSF_A domain-containing protein.
    
 
 0.837
BN9_076240
Uncharacterized protein.
    
 
 0.702
BN9_036550
Uncharacterized protein.
   
 
 0.671
BN9_045670
Uncharacterized protein.
   
 
 0.671
BN9_127850
DUF3449 domain-containing protein.
   
 
 0.635
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.