STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_065590Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
BN9_033720
ANK_REP_REGION domain-containing protein; Belongs to the histone H2A family.
   
 0.925
BN9_007420
Uncharacterized protein; Belongs to the actin family.
   
 0.912
BN9_003160
BSD domain-containing protein.
    
 0.899
BN9_118320
Uncharacterized protein.
    
 0.894
BN9_092000
Uncharacterized protein.
   
 0.891
BN9_130210
Uncharacterized protein.
    
 0.888
BN9_045470
General transcription factor IIH subunit.
    
 0.881
BN9_005370
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.879
BN9_072870
RuvB-like helicase; Belongs to the RuvB family.
    
 0.877
BN9_072860
RuvB-like helicase; Belongs to the RuvB family.
    
 0.877
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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