STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_083610AD domain-containing protein. (193 aa)    
Predicted Functional Partners:
BN9_120730
LsmAD domain-containing protein.
    
 0.988
BN9_100160
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.957
BN9_080870
PUM-HD domain-containing protein.
    
   0.806
BN9_082340
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.747
BN9_024910
Semialdhyde_dh domain-containing protein.
    
   0.644
BN9_047390
Sm domain-containing protein.
    
 
 0.568
BN9_072930
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.568
BN9_089050
Uncharacterized protein.
    
 
 0.545
BN9_004360
HTH La-type RNA-binding domain-containing protein.
    
 
 0.545
BN9_015360
Uncharacterized protein.
    
 
 0.545
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.