BN9_081830 protein (Albugo candida) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BN9_081830

Uncharacterized protein. (1189 aa)

Predicted Functional Partners:

BN9_098610

0.888

BN9_097870

0.867

BN9_119910

0.852

BN9_091020

0.846

BN9_052370

0.799

BN9_069140

0.798

BN9_086260

0.736

BN9_003360

0.735

BN9_016580

0.735

Ev167

0.735

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_003360	BN9_081830	A0A024FZ25	A0A024GKY6	PX domain-containing protein.	Uncharacterized protein.	0.735
BN9_003360	BN9_086260	A0A024FZ25	A0A024GLH5	PX domain-containing protein.	RPOLD domain-containing protein.	0.926
BN9_003360	BN9_119910	A0A024FZ25	A0A024GVC6	PX domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.947
BN9_016580	BN9_081830	A0A024G3K9	A0A024GKY6	Uncharacterized protein.	Uncharacterized protein.	0.735
BN9_016580	BN9_086260	A0A024G3K9	A0A024GLH5	Uncharacterized protein.	RPOLD domain-containing protein.	0.926
BN9_016580	BN9_119910	A0A024G3K9	A0A024GVC6	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.947
BN9_052370	BN9_069140	A0A024GC66	A0A024GGX2	Uncharacterized protein.	Uncharacterized protein.	0.448
BN9_052370	BN9_081830	A0A024GC66	A0A024GKY6	Uncharacterized protein.	Uncharacterized protein.	0.799
BN9_052370	BN9_091020	A0A024GC66	A0A024GMQ5	Uncharacterized protein.	Uncharacterized protein.	0.457
BN9_052370	BN9_097870	A0A024GC66	A0A024GP93	Uncharacterized protein.	Uncharacterized protein.	0.707
BN9_052370	BN9_098610	A0A024GC66	A0A024GQN3	Uncharacterized protein.	Uncharacterized protein.	0.892
BN9_069140	BN9_052370	A0A024GGX2	A0A024GC66	Uncharacterized protein.	Uncharacterized protein.	0.448
BN9_069140	BN9_081830	A0A024GGX2	A0A024GKY6	Uncharacterized protein.	Uncharacterized protein.	0.798
BN9_069140	BN9_091020	A0A024GGX2	A0A024GMQ5	Uncharacterized protein.	Uncharacterized protein.	0.756
BN9_069140	BN9_097870	A0A024GGX2	A0A024GP93	Uncharacterized protein.	Uncharacterized protein.	0.863
BN9_069140	BN9_098610	A0A024GGX2	A0A024GQN3	Uncharacterized protein.	Uncharacterized protein.	0.906
BN9_081830	BN9_003360	A0A024GKY6	A0A024FZ25	Uncharacterized protein.	PX domain-containing protein.	0.735
BN9_081830	BN9_016580	A0A024GKY6	A0A024G3K9	Uncharacterized protein.	Uncharacterized protein.	0.735
BN9_081830	BN9_052370	A0A024GKY6	A0A024GC66	Uncharacterized protein.	Uncharacterized protein.	0.799
BN9_081830	BN9_069140	A0A024GKY6	A0A024GGX2	Uncharacterized protein.	Uncharacterized protein.	0.798