STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_085590Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
BN9_023700
Uncharacterized protein.
   
 
 0.932
BN9_042460
Uncharacterized protein.
   
 0.932
BN9_102340
SAP domain-containing protein.
   
 
 0.923
BN9_015050
Uncharacterized protein.
    
 0.916
BN9_084430
Sm domain-containing protein.
   
 0.910
BN9_098540
RRM domain-containing protein.
  
 0.862
BN9_044170
RRM domain-containing protein.
  
 0.856
BN9_025640
Uncharacterized protein.
   
   0.838
BN9_030940
SF3b1 domain-containing protein.
   
 0.836
BN9_086120
Small nuclear ribonucleoprotein Sm D3.
   
 0.829
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.