STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_094090RBR-type E3 ubiquitin transferase. (525 aa)    
Predicted Functional Partners:
BN9_080770
PI3K/PI4K domain-containing protein.
    
 0.891
BN9_000060
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.884
BN9_095630
Ubiquitin-like domain-containing protein.
    
  0.854
BN9_098580
Ubiquitin-like domain-containing protein.
    
  0.854
BN9_065850
RING-type domain-containing protein.
    
 0.848
BN9_104520
Uncharacterized protein.
    
 0.848
BN9_104530
Uncharacterized protein.
    
 0.848
BN9_050660
Ubiquitin-like domain-containing protein.
    
 0.791
BN9_050670
Ubiquitin-like domain-containing protein.
    
 0.791
BN9_100090
Ubiquitin-like domain-containing protein.
    
 0.791
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.