STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_098540RRM domain-containing protein. (303 aa)    
Predicted Functional Partners:
BN9_005470
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.983
BN9_071700
Small nuclear ribonucleoprotein Sm D2.
   
 0.983
BN9_086120
Small nuclear ribonucleoprotein Sm D3.
   
 0.983
BN9_075330
Small nuclear ribonucleoprotein G.
   
 0.982
BN9_084430
Sm domain-containing protein.
   
 0.980
BN9_083770
Uncharacterized protein.
    
 0.970
BN9_093590
Nuclear cap-binding protein subunit 2.
    
0.966
BN9_119880
PSP domain-containing protein.
   
 0.963
BN9_105650
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.958
BN9_040140
Sm domain-containing protein.
   
 0.958
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.