STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_104620PAP-associated domain-containing protein. (847 aa)    
Predicted Functional Partners:
BN9_082340
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.574
BN9_023280
RRM domain-containing protein.
    
 
 0.571
BN9_022620
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
  0.508
BN9_015970
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.464
BN9_017300
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.464
BN9_015980
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.464
BN9_076520
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.424
BN9_102740
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.413
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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