STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_109600Tr-type G domain-containing protein. (940 aa)    
Predicted Functional Partners:
BN9_005660
MPN domain-containing protein.
   
 0.970
BN9_005470
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.966
BN9_132650
Uncharacterized protein.
   
 0.964
BN9_053820
WD_REPEATS_REGION domain-containing protein.
   
 0.963
BN9_084430
Sm domain-containing protein.
   
 0.963
BN9_091710
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.961
BN9_071700
Small nuclear ribonucleoprotein Sm D2.
   
 0.960
BN9_086120
Small nuclear ribonucleoprotein Sm D3.
   
 0.959
BN9_012900
Ribosomal_S17_N domain-containing protein.
  
 0.957
BN9_027520
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.957
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.