STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_125850PHD-type domain-containing protein. (1999 aa)    
Predicted Functional Partners:
BN9_010970
Histone H3; Belongs to the histone H3 family.
    
 0.905
BN9_017100
Histone domain-containing protein.
    
 0.905
BN9_046170
Histone H3; Belongs to the histone H3 family.
    
 0.905
BN9_017290
Uncharacterized protein.
    
 0.903
BN9_130090
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.903
BN9_080770
PI3K/PI4K domain-containing protein.
    
 0.859
BN9_010980
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.845
BN9_082380
RING-type domain-containing protein.
    
 
 0.837
BN9_000060
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.796
BN9_050660
Ubiquitin-like domain-containing protein.
    
  0.796
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.