STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_005183-hydroxyacyl-CoA dehydrogenase. (287 aa)    
Predicted Functional Partners:
SPOG_01933
Type I ferredoxin Etp1/cytochrome oxidase cofactor Cox15.
   
 0.733
SPOG_02716
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.689
SPOG_04760
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.686
SPOG_04796
Dihydrofolate reductase Dfr1; Belongs to the dihydrofolate reductase family.
   
 
 0.651
SPOG_02659
S-malonyltransferase Mct1.
  
 0.619
SPOG_01339
Ubiquitin conjugating enzyme Ubc4; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.608
SPOG_04294
ER chaperone SHR3 ue Psh3.
  
 0.601
SPOG_01472
Glutathione-dependent formaldehyde dehydrogenase.
 
 
 0.598
SPOG_04312
Peroxisomal targeting signal receptor Pex5.
    
 0.597
SPOG_03665
Alcohol dehydrogenase.
   
 0.586
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.