STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_00370SWI/SNF and RSC complex subunit Arp42; Belongs to the actin family. (428 aa)    
Predicted Functional Partners:
SPOG_04537
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
0.980
SPOG_04046
SWI/SNF complex subunit Snf5.
   
 0.974
SPOG_00738
SWI/SNF and RSC complex subunit Ssr3.
   
 0.974
SPOG_04446
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.971
SPOG_01878
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.970
SPOG_03262
RSC complex subunit Sfh1.
   
 0.957
SPOG_01004
ATP-dependent DNA helicase Snf21.
    
 0.955
SPOG_00110
Swr1 complex subunit Swc4.
   
 0.952
SPOG_02464
SWI/SNF chromatin-remodeling complex subunit snf22.
    
 0.951
SPOG_04426
Actin Act1.
  
 
0.949
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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