STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_01921Nucleoporin Nup157/170. (1314 aa)    
Predicted Functional Partners:
SPOG_00542
Nucleoporin Nup40, variant.
     
 0.999
SPOG_02395
Nucleoporin Nup186.
   
 0.999
SPOG_02461
Nuclear pore protein.
   
 0.999
SPOG_03929
Nucleoporin Nup189.
   
 0.998
SPOG_01420
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.993
SPOG_00286
Nucleoporin Seh1; Belongs to the WD repeat SEC13 family.
   
 0.993
SPOG_02186
Nucleoporin Nup44.
   
 0.992
SPOG_02273
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.991
SPOG_00484
Nucleoporin Nsp1.
   
 0.989
SPOG_04595
COPII-coated vesicle component Sec13; Belongs to the WD repeat SEC13 family.
    
 0.979
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.