STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_04314BAR adaptor protein Hob3. (277 aa)    
Predicted Functional Partners:
SPOG_01547
RhoGEF Gef1.
    
 
 0.973
SPOG_02166
BAR adaptor protein Hob1.
    
 
0.968
SPOG_00475
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.893
SPOG_01794
WASp.
   
 
 0.878
SPOG_01507
RhoGEF Gef3.
    
 
 0.858
SPOG_00944
App1 protein.
   
 
 0.790
SPOG_02152
Dynamin Dnm1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.775
SPOG_03012
GTPase Msp1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.775
SPOG_00111
Dynamin family protein Vps1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.775
SPOG_01098
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.708
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.