STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_01252Sphingosine hydroxylase; Belongs to the sterol desaturase family. (296 aa)    
Predicted Functional Partners:
SPOG_01743
Sphingosine-1-phosphate phosphatase.
    
 0.948
SPOG_01723
Sphingoid long chain base kinase.
   
 0.944
SPOG_00441
Pig-F.
    
 0.925
SPOG_02895
Sphingosine N-acyltransferase Lac1.
   
 0.922
SPOG_00651
Sphingosine N-acyltransferase Lag1.
   
 0.922
SPOG_01209
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
   
 
 0.888
SPOG_04261
3-keto sterol reductase.
   
 0.812
SPOG_00522
C-8 sterol isomerase Erg2.
   
 0.806
SPOG_04185
Squalene synthase Erg9.
  
 0.798
SPOG_03683
RNA-binding protein.
 
      0.759
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.