STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_0008160S ribosomal protein L21. (160 aa)    
Predicted Functional Partners:
SPOG_00140
AAA family ATPase ELf1.
   
   0.993
SPOG_00410
Translation elongation factor eEF3.
   
   0.993
SPOG_01858
60S ribosomal protein L22.
   
 0.989
SPOG_02757
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.988
SPOG_01519
60S ribosomal protein L7a, variant.
   
 0.988
SPOG_01923
60S ribosomal protein L31.
  
 0.988
SPOG_04775
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.987
SPOG_04459
60S ribosomal protein L26.
   
 0.987
SPOG_04534
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.986
SPOG_00725
60S ribosomal protein L28/L44.
   
 0.985
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.