STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_00121Damaged DNA binding protein Ddb1. (1078 aa)    
Predicted Functional Partners:
SPOG_01361
ERCC-8 DNA repair.
    
 0.999
SPOG_00128
WD repeat protein Cdt2.
    
 0.999
SPOG_02044
Cullin 4; Belongs to the cullin family.
  
 0.999
SPOG_04902
RING-box protein 1.
    
 0.986
SPOG_01819
WDR21 family WD repeat protein.
    
 0.948
SPOG_04605
COP9/signalosome complex subunit Csn1.
    
 0.925
SPOG_02759
WD repeat protein.
    
 0.923
SPOG_00868
SNF2 family helicase Rhp26.
    
 0.898
SPOG_03686
Ribonucleotide reductase inhibitor.
    
 
 0.874
SPOG_00719
COP9/signalosome complex subunit Csn5.
    
 0.856
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.