STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOG_00166RecA family ATPase Rhp57. (365 aa)    
Predicted Functional Partners:
SPOG_00491
RecA family ATPase Dmc1; Belongs to the RecA family.
  
0.984
SPOG_00146
RecA family ATPase Rhp55.
    
 0.981
SPOG_01865
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
0.974
SPOG_02720
ATP-dependent DNA helicase.
  
 
 0.958
SPOG_03947
RecQ type DNA helicase Rqh1.
   
 0.951
SPOG_00645
DNA recombination protein Rad22.
    
 0.932
SPOG_00114
RAD51D-like protein 1.
    
 0.920
SPOG_04728
Rad54 Rhp54.
    
 
 0.898
SPOG_01034
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.889
SPOG_03429
Holliday junction resolvase subunit Mus81.
   
 0.883
Your Current Organism:
Schizosaccharomyces cryophilus
NCBI taxonomy Id: 653667
Other names: S. cryophilus OY26, Schizosaccharomyces cryophilus CBS 11777, Schizosaccharomyces cryophilus NBRC 106824, Schizosaccharomyces cryophilus NRRL Y-48691, Schizosaccharomyces cryophilus OY26, Schizosaccharomyces sp. OY26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.