STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU64826.1Diguanylate cyclase; SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: gur:Gura_3308 diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein. (643 aa)    
Predicted Functional Partners:
ADU66531.1
EAL domain protein; KEGG: dak:DaAHT2_1869 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein.
    0.846
ADU66600.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: nam:NAMH_1803 GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
    0.838
ADU65948.1
EAL domain protein; KEGG: cvi:CV_0657 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein.
    0.832
ADU66317.1
Metal-dependent phosphohydrolase HD sub domain; KEGG: bse:Bsel_0662 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region.
  
 0.804
ADU64779.1
EAL domain protein; KEGG: dap:Dacet_2030 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
    0.778
ADU65047.1
Metal-dependent phosphohydrolase HD sub domain; KEGG: pmx:PERMA_0986 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; histidine kinase HAMP region domain protein.
 
    0.736
ADU65825.1
KEGG: plm:Plim_0679 response regulator receiver; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region.
 
    0.726
ADU65970.1
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: plm:Plim_0679 response regulator receiver.
 
 
   0.725
ADU66231.1
TIGRFAM: hemerythrin-like metal-binding protein; PFAM: metal-dependent phosphohydrolase HD sub domain; Hemerythrin HHE cation binding domain protein; KEGG: dap:Dacet_2540 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
 
    0.719
ADU66816.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: plm:Plim_2762 PAS sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver.
 
 
 0.719
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.