STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU64853.1KEGG: ttu:TERTU_1521 Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase. (499 aa)    
Predicted Functional Partners:
ADU65340.1
KEGG: dbr:Deba_1961 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor.
 
   
 0.808
ADU65726.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; PAS fold domain protein; KEGG: nis:NIS_1076 two-component sensor histidine kinase; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; ATP-binding region ATPase domain protein.
   
 
 0.798
ADU64866.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: sdl:Sdel_0894 ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
   
 
 0.701
ADU64823.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; KEGG: sat:SYN_01077 sensor proteinluxq; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver.
   
 
 0.642
ADU64851.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; KEGG: wsu:WS1328 putative two-component sensor; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein.
  
 
 0.621
ADU66274.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; KEGG: dba:Dbac_1513 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.588
ADU64852.1
Putative ammonium transporter, marine subtype; KEGG: ant:Arnit_2887 putative ammonium transportertype; TIGRFAM: putative ammonium transporter, marine subtype; ammonium transporter; PFAM: ammonium transporter.
     
 0.576
ADU66555.1
TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold domain protein; ATP-binding region ATPase domain protein; KEGG: gca:Galf_0762 multi-sensor hybrid histidine kinase; SMART: response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; ATP-binding region ATPase domain protein.
   
 
 0.568
ADU67245.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; CHASE4 domain protein; GAF domain protein; KEGG: dde:Dde_1360 GAF sensor hybrid histidine kinase; SMART: PAS domain containing protein; PAC repeat-containing protein; GAF domain protein; ATP-binding region ATPase domain protein.
   
 
 0.562
ADU66816.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: plm:Plim_2762 PAS sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver.
   
 
 0.558
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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