STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU64951.1KEGG: hch:HCH_06149 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase. (605 aa)    
Predicted Functional Partners:
ADU64950.1
PFAM: Type II secretion system F domain; KEGG: cps:CPS_4572 MSHA biogenesis protein MshG.
 
 0.988
ADU64956.1
KEGG: pca:Pcar_0382 MshA biogenesis protein MshI-2.
 
 
 0.970
ADU65057.1
PFAM: Type II secretion system F domain; KEGG: ppr:PBPRA3279 putative MSHA biogenesis protein MshG.
 
 0.951
ADU66017.1
KEGG: psa:PST_0126 general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain.
 
 0.951
ADU64819.1
KEGG: gpb:HDN1F_34760 general secretion pathway protein L; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L.
  
 
 0.911
ADU64953.1
PFAM: type II and III secretion system protein; KEGG: sua:Saut_0021 type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.911
ADU64957.1
KEGG: cja:CJA_2401 putative MSHA biogenesis protein MshI.
 
 
 
 0.910
ADU64949.1
Hypothetical protein; KEGG: sua:Saut_1576 N-terminal methylation.
  
 
 0.891
ADU65350.1
Prepilin peptidase; KEGG: dat:HRM2_30410 PilD; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV.
 
 
 0.880
ADU64955.1
KEGG: pca:Pcar_0383 MshA biogenesis protein, MshJ-like.
 
  
 0.848
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.