STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU65425.1PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: srm:SRM_03035 thiol:disulfide interchange protein DsbD. (159 aa)    
Predicted Functional Partners:
ADU65543.1
PFAM: Redoxin domain protein; KEGG: tal:Thal_0395 redoxin domain protein.
 
   
 0.780
ADU67051.1
PFAM: cytochrome c assembly protein; KEGG: wsu:WS2159 cytochrome c biogenesis protein (ycf5).
  
  
 0.673
ADU65426.1
PFAM: alpha/beta hydrolase fold; KEGG: gsu:GSU3157 alpha/beta fold family hydrolase.
  
  
 0.625
ADU66769.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.505
ADU66925.1
KEGG: ddf:DEFDS_0520 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.505
ADU65423.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: geo:Geob_2795 indolepyruvate oxidoreductase subunit beta.
       0.445
ADU65424.1
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
       0.440
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.430
ADU66384.1
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: glo:Glov_2275 cytochrome c biogenesis protein transmembrane region.
 
  
 0.413
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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