STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU65664.1KEGG: dak:DaAHT2_1525 CRISPR-associated protein, Csy3 family; TIGRFAM: CRISPR-associated protein, Csy3 family; PFAM: CRISPR-associated protein Csy3. (332 aa)    
Predicted Functional Partners:
ADU65668.1
KEGG: tau:Tola_1360 CRISPR-associated protein, Csy1 family; TIGRFAM: CRISPR-associated protein, Csy1 family; PFAM: CRISPR-associated protein Csy1.
 
 
 
 0.981
ADU65663.1
KEGG: ypb:YPTS_2599 CRISPR-associated Csy4 family protein; TIGRFAM: CRISPR-associated protein, Csy4 family; PFAM: CRISPR-associated protein Csy4.
 
   
 0.958
ADU65665.1
KEGG: tau:Tola_1361 CRISPR-associated protein, Csy2 family; TIGRFAM: CRISPR-associated protein, Csy2 family; PFAM: CRISPR-associated protein Csy2.
 
   
 0.939
ADU65227.1
KEGG: bpt:Bpet3736 putative transposase.
   
   0.816
ADU65228.1
KEGG: bpt:Bpet3736 putative transposase.
   
   0.816
ADU67198.1
Transposase; Manually curated; KEGG: mma:MM_3343 transposase.
   
   0.816
cas1
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
   
 0.796
ADU65666.1
Hypothetical protein.
       0.484
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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