STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU65747.1TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: alv:Alvin_1380 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region. (429 aa)    
Predicted Functional Partners:
ADU67262.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold domain protein; KEGG: pca:Pcar_2709 two component signal transduction response regulator; SMART: GGDEF domain containing protein; response regulator receiver; PAS domain containing protein.
 
 0.813
ADU66201.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sdl:Sdel_0392 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
 
   0.800
ADU64786.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: dap:Dacet_0747 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein.
 
 
 0.798
ADU65746.1
KEGG: shn:Shewana3_1809 hypothetical protein.
       0.746
ADU66609.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: azl:AZL_009270 hypothetical protein; SMART: GGDEF domain containing protein.
 
 
   0.672
ADU66724.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: dak:DaAHT2_0229 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
 
   0.634
ADU66471.1
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: dbr:Deba_0792 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
 
 0.632
ADU66600.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: nam:NAMH_1803 GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.626
ADU64779.1
EAL domain protein; KEGG: dap:Dacet_2030 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.593
ADU64826.1
Diguanylate cyclase; SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: gur:Gura_3308 diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein.
 
 
   0.533
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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