STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU65821.1TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: dak:DaAHT2_0896 Ni/Fe-hydrogenase, b-type cytochrome subunit. (239 aa)    
Predicted Functional Partners:
ADU65819.1
KEGG: dak:DaAHT2_0894 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 0.999
ADU65820.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: dak:DaAHT2_0895 nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.998
ADU65195.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: dak:DaAHT2_0675 cytochrome-c3 hydrogenase.
 
 
 0.993
ADU65196.1
KEGG: dak:DaAHT2_0674 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 
 0.993
ADU65822.1
Hydrogenase maturation protease; KEGG: slo:Shew_1762 hydrogenase expression/formation protein; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein.
 
  
 0.942
ADU65823.1
KEGG: nam:NAMH_0578 hypothetical protein.
     
 0.657
ADU66034.1
KEGG: slo:Shew_1759 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K.
 
   
 0.542
ADU66663.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cob:COB47_0876 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
   
  
 0.496
ADU66849.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: glo:Glov_3720 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
   
  
 0.484
ADU65547.1
KEGG: abu:Abu_1088 cytochrome bd oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
  
    0.480
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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