STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66016.1PFAM: Exopolysaccharide synthesis ExoD; KEGG: caa:Caka_1421 exopolysaccharide synthesis ExoD. (208 aa)    
Predicted Functional Partners:
ADU66017.1
KEGG: psa:PST_0126 general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain.
       0.773
ADU66018.1
TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: gpb:HDN1F_34690 general secretion pathway protein E; SMART: AAA ATPase.
       0.773
ADU66019.1
General secretion pathway protein D; KEGG: hch:HCH_04610 type II secretory pathway, component PulD; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein.
       0.732
ADU66020.1
KEGG: hch:HCH_04611 general secretion pathway protein C.
       0.456
ADU65960.1
KEGG: cyb:CYB_2034 hypothetical protein.
  
     0.418
ADU67115.1
KEGG: tgr:Tgr7_0708 sucrose-phosphate synthase; TIGRFAM: sucrose-phosphate synthase; HAD-superfamily hydrolase, subfamily IIB; Sucrose-phosphate phosphatase subfamily; PFAM: sucrose-6F-phosphate phosphohydrolase; glycosyl transferase group 1.
      
 0.405
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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