STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66229.1PFAM: MscS Mechanosensitive ion channel; KEGG: tgr:Tgr7_0569 MscS mechanosensitive ion channel. (277 aa)    
Predicted Functional Partners:
ADU66230.1
KEGG: tgr:Tgr7_0568 hypothetical protein.
 
     0.950
ADU66231.1
TIGRFAM: hemerythrin-like metal-binding protein; PFAM: metal-dependent phosphohydrolase HD sub domain; Hemerythrin HHE cation binding domain protein; KEGG: dap:Dacet_2540 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
     
 0.780
ADU66232.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.773
ADU66233.1
PFAM: sodium:neurotransmitter symporter; KEGG: bpf:BpOF4_11270 sodium-dependent transporter.
       0.535
ADU66235.1
PFAM: UspA domain-containing protein; KEGG: ppd:Ppro_3112 UspA domain-containing protein.
 
     0.426
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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