STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66315.1PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bpd:BURPS668_A2861 serine metalloprotease; Belongs to the peptidase S8 family. (524 aa)    
Predicted Functional Partners:
ADU66793.1
KEGG: gsu:GSU2299 cytochrome c family protein.
   
 
 0.912
ADU66317.1
Metal-dependent phosphohydrolase HD sub domain; KEGG: bse:Bsel_0662 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region.
 
   
 0.820
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.809
ADU66479.1
KEGG: bpf:BpOF4_10105 TraB family protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein.
    
   0.802
ADU66318.1
PFAM: AMP-dependent synthetase and ligase; KEGG: ngk:NGK_1402 long-chain-fatty-acid--CoA ligase.
    
 0.792
ADU66314.1
Hypothetical protein; KEGG: aav:Aave_1879 OmpA domain-containing protein.
       0.773
ADU66316.1
KEGG: tgr:Tgr7_0228 hypothetical protein.
       0.773
ADU65994.1
KEGG: tgr:Tgr7_0290 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase.
   
 0.581
ADU66319.1
KEGG: gem:GM21_2194 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein.
  
    0.558
ADU66544.1
KEGG: toc:Toce_1218 competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; Belongs to the CinA family.
     
 0.489
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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