STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66458.1PFAM: NUDIX hydrolase; KEGG: sto:ST2243 MutT family protein. (144 aa)    
Predicted Functional Partners:
ADU66457.1
TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: tra:Trad_2800 Mg chelatase, subunit ChlI; SMART: AAA ATPase.
       0.775
ADU64923.1
PFAM: NUDIX hydrolase; KEGG: gme:Gmet_1790 NUDIX hydrolase.
 
  
 0.589
ADU66455.1
TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; KEGG: glo:Glov_3442 diguanylate cyclase with PAS/PAC sensor; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein.
  
    0.551
ADU66454.1
KEGG: glo:Glov_3443 ABC transporter, substrate-binding protein, putative.
       0.542
ADU66456.1
Metal-dependent phosphohydrolase HD sub domain; KEGG: alv:Alvin_1380 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
       0.542
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.491
hisI
phosphoribosyl-ATP diphosphatase; KEGG: cth:Cthe_2889 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; In the N-terminal section; belongs to the PRA-CH family.
     
 0.490
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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