STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66504.1PFAM: Ppx/GppA phosphatase; KEGG: gur:Gura_2137 Ppx/GppA phosphatase. (314 aa)    
Predicted Functional Partners:
ADU66539.1
PFAM: Ppx/GppA phosphatase; KEGG: mgm:Mmc1_0350 Ppx/GppA phosphatase.
  
  
 
0.929
ADU67058.1
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.918
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.907
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
 
    0.903
ADU66505.1
KEGG: mxa:MXAN_3783 hexapaptide repeat-containing transferase.
  
    0.790
ADU66506.1
HflC protein; HflC and HflK could regulate a protease.
       0.773
ADU66508.1
PFAM: NUDIX hydrolase; KEGG: ade:Adeh_0158 NUDIX hydrolase.
     
 0.764
ADU66507.1
HflK protein; HflC and HflK could encode or regulate a protease.
       0.757
ADU66509.1
TRAP dicarboxylate transporter, DctP subunit; KEGG: bha:BH2750 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein); TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7.
       0.757
ADU66510.1
Response regulator receiver; KEGG: aar:Acear_1035 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver.
       0.757
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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