STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66530.1KEGG: caa:Caka_1531 hypothetical protein. (169 aa)    
Predicted Functional Partners:
ADU66529.1
KEGG: bfo:BRAFLDRAFT_117561 hypothetical protein.
       0.762
ADU65689.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dak:DaAHT2_2622 male sterility domain protein.
 
     0.678
ADU66528.1
Hpt domain protein; KEGG: hch:HCH_04142 chemotaxis protein histidine kinase-like kinase; PFAM: Hpt domain protein; SMART: Hpt domain protein.
       0.460
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.