STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66736.1TIGRFAM: TonB family protein; KEGG: tkm:TK90_0441 TonB family protein. (242 aa)    
Predicted Functional Partners:
ADU66737.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cli:Clim_1563 biopolymer transport protein ExbD/TolR.
  
 
 0.939
ADU66744.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dap:Dacet_0825 TonB-dependent receptor plug.
 
 
 0.934
ADU66738.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: aha:AHA_3435 hypothetical protein.
  
 
 0.912
ADU66742.1
PFAM: cobalt transport protein; KEGG: hha:Hhal_0380 cobalt transport protein.
 
     0.825
ADU66641.1
KEGG: sdl:Sdel_1574 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
 
 0.808
ADU66740.1
PFAM: protein of unknown function DUF1008; KEGG: dap:Dacet_0822 hypothetical protein.
  
  
 0.777
ADU66739.1
KEGG: str:Sterm_0589 flavodoxin family protein.
       0.773
ADU66741.1
KEGG: hha:Hhal_0379 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.769
ADU66336.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dak:DaAHT2_1554 TonB-dependent receptor plug.
 
 
 
 0.765
ADU66523.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: cja:CJA_2679 HasR.
  
 
 0.764
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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