STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66779.1KEGG: tgr:Tgr7_3156 glucose sorbosone dehydrogenase. (378 aa)    
Predicted Functional Partners:
ADU66780.1
KEGG: aeh:Mlg_1184 hypothetical protein.
       0.512
ADU66776.1
Hypothetical protein; KEGG: dak:DaAHT2_1867 tetratricopeptide TPR_2 repeat protein.
       0.497
ADU66777.1
Hypothetical protein; KEGG: dsa:Desal_3384 hemolysin-type calcium-binding region.
       0.497
ADU66778.1
PFAM: leucine-rich repeat-containing protein; KEGG: cte:CT1526 Rab family protein.
       0.497
ADU67069.1
KEGG: geo:Geob_2060 hypothetical protein.
 
     0.426
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.