STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU66802.1PFAM: YCII-related; KEGG: ara:Arad_4352 YciI-like protein. (96 aa)    
Predicted Functional Partners:
ADU66803.1
Protein of unknown function Met10; KEGG: sat:SYN_01029 SAM-dependent methyltransferase; PFAM: protein of unknown function Met10; SMART: PUA domain containing protein.
 
     0.806
hisI
phosphoribosyl-ATP diphosphatase; KEGG: cth:Cthe_2889 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.524
ADU66804.1
PFAM: Conserved hypothetical protein CHP00730; KEGG: rba:RB10175 hypothetical protein.
       0.482
ADU66805.1
PFAM: inositol monophosphatase; KEGG: ddf:DEFDS_1499 inositol-phosphate phosphatase.
       0.482
ADU66806.1
KEGG: mgm:Mmc1_3411 hypothetical protein.
       0.482
gmhA
Sugar isomerase (SIS); Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
   
    0.475
ADU66801.1
TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; KEGG: aoe:Clos_2826 multi-sensor signal transduction histidine kinase; SMART: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein.
       0.459
ADU66807.1
PFAM: Smr protein/MutS2; KEGG: fnu:FN1563 hypothetical protein.
       0.414
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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