STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU67253.1KEGG: glo:Glov_1036 cobalamin synthesis protein P47K. (229 aa)    
Predicted Functional Partners:
ADU67252.1
KEGG: glo:Glov_1037 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
    0.978
ADU67254.1
PFAM: Domain of unknown function DUF1858; KEGG: glo:Glov_1035 hypothetical protein.
 
     0.948
ADU65013.1
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dvm:DvMF_1013 peptidylprolyl isomerase FKBP-type.
    
 
 0.825
ADU66033.1
KEGG: sdl:Sdel_1097 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC).
  
  
 0.748
ADU66032.1
KEGG: tcx:Tcr_2041 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein.
  
  
 0.739
ADU65252.1
KEGG: ddf:DEFDS_1680 hypothetical protein.
  
 
 0.692
hypA
Hydrogenase expression/synthesis HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
 
 0.692
ADU67255.1
ATP-binding region ATPase domain protein; KEGG: glo:Glov_2590 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein.
       0.462
ADU65196.1
KEGG: dak:DaAHT2_0674 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
  
  
 0.431
ADU65819.1
KEGG: dak:DaAHT2_0894 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
  
  
 0.431
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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