STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU67330.1PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dbr:Deba_0907 tetratricopeptide TPR_2 repeat protein. (1018 aa)    
Predicted Functional Partners:
ADU67329.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: ddf:DEFDS_0833 two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
       0.773
ADU67328.1
PFAM: Uncharacterised protein family UPF0102; KEGG: hha:Hhal_2103 hypothetical protein; Belongs to the UPF0102 family.
       0.661
ADU67327.1
KEGG: htu:Htur_0491 protein of unknown function DUF255.
       0.655
ADU66081.1
KEGG: vvu:VV2_0373 WD-40 repeat-containing protein.
  
  
 0.524
ADU66304.1
KEGG: pca:Pcar_2975 TolB protein.
  
  
 0.524
ADU66873.1
PFAM: type II and III secretion system protein; KEGG: hha:Hhal_0329 pilus (MSHA type) biogenesis protein MshL; Belongs to the bacterial secretin family.
  
  
 0.424
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
 
 0.400
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.