STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK68664.1PFAM: Domain of unknown function DUF1821; KEGG: ana:all2702 hypothetical protein. (188 aa)    
Predicted Functional Partners:
ACK68791.1
KEGG: ava:Ava_3098 hypothetical protein.
  
     0.758
ACK70367.1
Conserved hypothetical protein; KEGG: ana:alr3577 unknown protein.
  
     0.757
ACK68665.1
PFAM: aldo/keto reductase; KEGG: ava:Ava_3061 aldo/keto reductase.
       0.723
ACK73174.1
KEGG: ava:Ava_0421 hypothetical protein.
  
     0.721
cpcT-3
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.685
ACK70188.1
Conserved hypothetical protein; KEGG: ana:all0802 unknown protein.
  
     0.661
ACK69360.1
KEGG: npu:Npun_R0603 hypothetical protein.
  
     0.658
ACK71594.1
KEGG: ava:Ava_2429 hypothetical protein.
  
     0.646
ACK73568.1
Signal transduction histidine kinase, LytS; KEGG: npu:Npun_R1884 hypothetical protein.
  
     0.627
ACK69522.1
KEGG: ava:Ava_0870 hypothetical protein.
  
     0.626
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.