STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK68725.1PFAM: protein of unknown function DUF86; KEGG: mar:MAE_03700 hypothetical protein. (116 aa)    
Predicted Functional Partners:
ACK68726.1
PFAM: DNA polymerase beta domain protein region; KEGG: mar:MAE_03710 hypothetical protein.
 
    0.948
ACK70872.1
PFAM: protein of unknown function DUF86; KEGG: syf:Synpcc7942_0275 hypothetical protein.
  
  
  0.849
ACK73264.1
PFAM: DNA polymerase beta domain protein region; KEGG: mar:MAE_03710 hypothetical protein.
 
    0.785
ACK68764.1
PFAM: DNA polymerase beta domain protein region; KEGG: mar:MAE_47400 DNA polymerase beta domain.
  
    0.751
ACK69452.1
PFAM: DNA polymerase beta domain protein region; KEGG: ter:Tery_0898 DNA polymerase, beta-like region.
  
    0.555
ACK69451.1
PFAM: protein of unknown function DUF86; KEGG: lch:Lcho_0358 protein of unknown function DUF86.
  
  
 
0.506
ACK72284.1
PFAM: protein of unknown function DUF86; KEGG: syf:Synpcc7942_0032 hypothetical protein.
  
  
 
0.498
ACK71876.1
PFAM: protein of unknown function DUF86; KEGG: syp:SYNPCC7002_G0033 hypothetical protein.
  
  
 
0.482
ACK68763.1
PFAM: protein of unknown function DUF86; KEGG: mar:MAE_47410 hypothetical protein.
  
  
 
0.464
ACK73265.1
PFAM: protein of unknown function DUF86; KEGG: mar:MAE_43050 nucleotidyltransferase.
  
  
 
0.464
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.