STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK68848.1PFAM: copper resistance B precursor; KEGG: afw:Anae109_4266 copper resistance B precursor. (353 aa)    
Predicted Functional Partners:
ACK68849.1
TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pae:PA2065 copper resistance protein A precursor.
 
  
 0.985
ACK70358.1
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: syp:SYNPCC7002_A2660 hypothetical protein.
 
  
 0.787
ACK70995.1
KEGG: mar:MAE_17220 blue-copper-protein-like protein.
  
  
 0.787
ACK70681.1
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: gme:Gmet_2155 multicopper oxidase, type 2.
  
  
 0.746
ACK70360.1
PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: syp:SYNPCC7002_A2658 2OG-Fe(II) oxygenase family oxidoreductase.
  
     0.639
ACK68850.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ava:Ava_0503 hypothetical protein.
       0.417
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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