STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK68928.1PFAM: response regulator receiver; KEGG: mar:MAE_28240 hypothetical protein. (564 aa)    
Predicted Functional Partners:
ACK68634.1
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: ava:Ava_0661 two component LuxR family transcriptional regulator.
  
   
 0.732
ACK69862.1
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: amr:AM1_5052 two component transcriptional regulator, LuxR family.
  
   
 0.724
ACK69263.1
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: gvi:gll4097 two-component response regulator.
  
     0.713
ACK68927.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: npu:Npun_R5017 ferric uptake regulator family protein; Belongs to the Fur family.
       0.698
ACK72055.1
PFAM: regulatory protein LuxR; KEGG: mar:MAE_54580 transcriptional regulator.
  
     0.598
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.559
ACK73227.1
KEGG: mar:MAE_04000 glycogen debranching enzyme.
  
     0.509
ACK73533.1
KEGG: mar:MAE_53710 hypothetical protein.
  
     0.496
ACK68671.1
PFAM: response regulator receiver; KEGG: ana:alr3594 two-component response regulator.
  
     0.489
ACK71685.1
KEGG: mar:MAE_09730 type IV pilus assembly protein.
  
     0.419
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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