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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK68949.1PFAM: RimK domain protein ATP-grasp; KEGG: npu:Npun_R1001 RimK domain-containing protein ATP-grasp. (277 aa)    
Predicted Functional Partners:
ACK72372.1
KEGG: bja:blr1104 hypothetical protein.
  
     0.762
ACK72740.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2.
  
     0.761
ACK72730.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mba:Mbar_A2604 TPR repeat-containing protein.
  
     0.758
ACK68947.1
Conserved hypothetical protein; KEGG: gvi:gsr4049 unknown protein.
       0.563
ACK68948.1
KEGG: mar:MAE_08460 hypothetical protein.
       0.563
ACK70294.1
KEGG: ava:Ava_1412 hypothetical protein.
  
     0.558
ACK68950.1
PFAM: protein of unknown function DUF1361; KEGG: npu:Npun_F6163 hypothetical protein.
       0.545
ACK73505.1
KEGG: cau:Caur_3450 hypothetical protein.
  
     0.517
ACK69821.1
PFAM: protein of unknown function DUF820; KEGG: gvi:gll2990 hypothetical protein.
  
     0.493
ACK71614.1
PFAM: YcfA family protein; KEGG: npu:Npun_F3501 YcfA family protein.
  
     0.474
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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