STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69080.1PFAM: SNARE associated Golgi protein; KEGG: mar:MAE_19440 hypothetical protein. (224 aa)    
Predicted Functional Partners:
ACK73294.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: syp:SYNPCC7002_A1295 mercuric reductase.
     0.603
ACK69079.1
2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mar:MAE_30620 periplasmic protease.
       0.514
ACK69933.1
PFAM: protein of unknown function DUF1499; KEGG: amr:AM1_3138 hypothetical protein.
 
     0.505
ACK70650.1
PFAM: Radical SAM domain protein; KEGG: amr:AM1_5084 radical SAM domain protein.
 
   
 0.489
ACK73678.1
KEGG: ava:Ava_0272 hypothetical protein.
 
     0.477
ACK71866.1
PFAM: glycosyl transferase family 2; KEGG: mar:MAE_06070 glycosyl transferase family 2.
  
     0.466
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.