Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACK69204.1PFAM: protein of unknown function DUF445; KEGG: npu:Npun_R4433 hypothetical protein. (413 aa)    
Predicted Functional Partners:
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol.
       0.783
ACK69411.1
KEGG: amr:AM1_0853 hypothetical protein.
  
     0.764
ACK71702.1
KEGG: syn:ssr0657 hypothetical protein.
  
     0.764
ACK69047.1
PFAM: Domain of unknown function DUF1815; KEGG: mar:MAE_42030 hypothetical protein.
  
     0.763
ACK72977.1
KEGG: mar:MAE_28340 hypothetical protein.
  
     0.761
ACK71133.1
KEGG: mar:MAE_53690 hypothetical protein.
  
     0.760
ACK71629.1
KEGG: mar:MAE_55260 hypothetical protein.
  
     0.758
ACK69220.1
KEGG: syn:slr0975 hypothetical protein.
  
     0.726
ACK69824.1
KEGG: mar:MAE_47510 hypothetical protein.
  
     0.725
ACK73227.1
KEGG: mar:MAE_04000 glycogen debranching enzyme.
  
     0.719
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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